Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGLFVAPVLAILGAISADEMEKKRDDAKAYYSQVEVAVKKADVVIDNLQAVKKMADLFTRQITKFDALFFLLSQDAIATMKKHHYDTSRYNQKEKDQLCVTVSTLFSLSAFLKAPIMDKHQKLNKKAQKALNLMRDQMDSLENGNYSLDGIRFRQAQLKDLRDDKTS |
3VKH Chain:A ((1972-2026)) | ---------------------EIKQKDAREL--QVQLDVRNKEIAV---QKVKAYADLEKAEPAIIEA------QEAVSTIKKKHLD--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9913 for 225 contacts (44.1/contact) +
2D Compatibility (PS) -5690 + (NN) -751 + (LL) 8372
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 6794.0 ( 30.20 by residue)
QMean score : 0.180
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