Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MNFYQKIYTHKVVFSSLFFL-------LFLFNVETLLFSHFSDD-FSQLFFLFENHVYDFIIKL----------DYLGLIGVSSIYLLALILKPFTLTRQKCACIGILCLSFYAWNFPIKNSSIALYVFYFALLG---------------TLLWRFLGASMKQSFLP-SMNICVVWVFA---SSLQSFRFLSVSD---CVDFSLFILALF-------LLILVLIYHKRLFGLYEYANTLILI-VGLCVVVLCSSMFIQTKEYYGMRLGFYF-----LGLLGWLLEYIHNTLRRLEHKI- |
| 4AVA Chain:A ((2-333)) | DGIAELTGARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVHIPGVGERLLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGETLYRRFMSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVAEIAFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVPGPGELSLGREMVDQINRVARQVIEAVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290730 for 1766 contacts (-164.6/contact) +
2D Compatibility (PS) -26132 + (NN) -2872 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -327834.0 ( -185.64 by residue)
QMean score : 0.214
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