Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVRFFGPI------KEENFFIKANGLKELRAIL-------------QEKEGLKEWLGVCAIALNDHL--IDNLDMPLKDGDVISLLPPVCGG
2G1E Chain:A ((1-90))
MVTVRYYATLRPITKKKEETF----NGISKISELLERLKVEYGSEFTKQMYDGNNLFKNVIILVNGNNITSMKGLDTEIKDDDKIDLFPPVAGG
General information:
TITO was launched using:
RESULT:
Template:
2G1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29899 for 430 contacts (-69.5/contact) +
2D Compatibility (PS) -7543 + (NN) -370 + (LL) 544
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -45368.0 ( -105.51 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2G1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G1E-query.scw
PDB file :
Tito_Scwrl_2G1E.pdb
: