Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLVKKIGVVIMILVCFLACSQESFIKMQKKAQEQE-NDGSKRPSYVDSDYEV---FSETIFLQNMVYQPIEERNAFFQLTKDEDNSFNPENSVILLNEPSDNSEKNLLSYPNDPNNNEDNANNSQKNPFLYKPKRKTKNPKLIEYSQQDFYPLKNGDIIMSKEGDQWLIEIQSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQIKGKISSYVYTTNNGSLSLRPFYESFLLEKKSDNVYTIENKALDTMEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES |
2B78 Chain:A ((324-384)) | -------NGLIIASTNAANMTVSQFKKQIEKGFGKQKHTY-LDLQQLPSDFAVNVQDESSNYLKVFTIKV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23505 for 301 contacts (-78.1/contact) +
2D Compatibility (PS) -5475 + (NN) 2791 + (LL) 13588
1D Compatibility (HY) 400 + (ID) 400
Total energy: -12601.0 ( -41.86 by residue)
QMean score : 0.266
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