Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDANCLKLMFVAGSQDFYHIKGDRTNALLDTLELALQSKITAFQFRQKGDLALQDPV-EIKRLALECQKLCKKYGTPFIINDEVRLALELKADGVHVGQEDMAIEEVVTLCQKRLFIGLSVNTLEQALKARHLDHIAYLGVGPIFPTPSKKDAKEVVGVNLLKKIHDSGVEKPLIAIGGITTDNASKLQK--FSGIAVISAITQAKDKALAVEKLLKNA
1XI3 Chain:A ((17-208))
-----------------LYVITDRRLKPEVESVREALEGGATAIQMRIK-----NAPTREMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQLGPEDMPI-EVAKEIAPNLIIGASVYSLEEALEAEK-KGADYLGAGSVFPT----DAR-VIGLEGLRKIVES-VKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIV
General information:
TITO was launched using:
RESULT:
Template:
1XI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143762 for 1581 contacts (-90.9/contact) +
2D Compatibility (PS) -20295 + (NN) -16549 + (LL) 1740
1D Compatibility (HY) -15200 + (ID) 3950
Total energy: -198016.0 ( -125.25 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1XI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XI3-query.scw
PDB file :
Tito_Scwrl_1XI3.pdb
: