Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVRGVLSLQARLSFKNCFLVKSLKPSQLTLMLTGFLGGFSFLTTGFW
3D2N Chain:A ((20-59))
---------------------CSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNN-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3D2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9257 for 164 contacts (-56.4/contact) +
2D Compatibility (PS) -3873 + (NN) 1736 + (LL) 4004
1D Compatibility (HY) -800 + (ID) 750
Total energy: -8940.0 ( -54.51 by residue)
QMean score : -0.018
(partial model without unconserved sides chains):
PDB file :
Tito_3D2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D2N-query.scw
PDB file :
Tito_Scwrl_3D2N.pdb
: