Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRASFVEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRA---LKGLEVEGIFTHLSNADS---NIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRL-LNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRAL--GNRIQVAINNQLAPLIGKVCMDQCFVKLNDIE-AKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
| 4ECL Chain:A ((7-368)) | -----AYLEINLNNLEHNVNTLQKAMSPKCELMAVVKAEAYGHGMYEVTTYLEQIGVSSFAVATIDEGIRLRKYGISSEILILGYTSPSRAKELCKYELTQTLIDYR----YSLLLNKQGYDIKAHIKIDTGMHRLGF-----STEDKDKILAAFSLKHIKVAGIFTHLCAADSLEENDVAFTNKQIGSFYKVLDWLKSSGLNIPKVHIQSSYGLL-----NYPELECDYIRVGVALYGVLSSTNDKTKLELDLRPVLSLKAKVVLIRKIKQGESVGYSRAFTATRDSLIAILPIGYADGFPRNLSCGNS-YVLIGGRQAPIVGKICMDQLAVDVTDIPNVKTGSIATLIGKDGKEEITAPMVAESAESITNELLSRMGHRLNIIRR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ECL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -228680 for 2980 contacts (-76.7/contact) +
2D Compatibility (PS) -37581 + (NN) -6578 + (LL) 1620
1D Compatibility (HY) -28800 + (ID) 6600
Total energy: -306619.0 ( -102.89 by residue)
QMean score : 0.559
|
|
|