Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHKEIVIGVDIGSRKICAIVAEFKDGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADEDRNNPISSFRESYHPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIA-TLSNDERELGVACVDMGGETCNLTIYSGNSIRYNKYLPV---------GSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFESGAETPSQS-----------VQIPTTGSDG----HESHIVPLSEIQTIMRERALETFKIIHRSIQDSGFEEHLGGGVVLTGGMALMKGIKELARTHFTNYPVRLATPVEKYNIMGMFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGIIRYHESDDYIRKAHQSNPTPHIHSSPTERNLSDLKTPSAPLNTAKNDDFLPIKPTEQKGFFQNLLDKISKIF |
| 1DKG Chain:D ((161-373)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGLEVKRIINEPTAAALAYGLDK-TGNRTIAVYDLGGGTFDISIIEID----EKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67168 for 1308 contacts (-51.4/contact) +
2D Compatibility (PS) -19353 + (NN) -2238 + (LL) 17756
1D Compatibility (HY) -10800 + (ID) 1950
Total energy: -83753.0 ( -64.03 by residue)
QMean score : 0.362
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