Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTETDNFNKQDKHKLDYRKINYESKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQNPKHKRTWWSLWLYKKPSDDALDIKVLDVFDDGKYTYFRYDRDQAFSKFPYTYKVVDGYDNPINSRVVGNYIIAEDISKKWTLRSGKEYVCVRRDKRKYQKSRDFMRLKRLLEQDEAMKAKRNNMHLIEDTTPQPKNAISVTELLAQIKNQTPSKECRALNEEEVKTLEEVKNIIKTPKPLQKDLKKNAKKHTIKTQYCVPIPYIERLKTTDGLEKHQKGLNNTKKQIQANPIEEIKENKK |
| 1VPZ Chain:A ((8-18)) | ------------------------------VGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 75 for 17 contacts (4.4/contact) +
2D Compatibility (PS) -1072 + (NN) -411 + (LL) 16640
1D Compatibility (HY) 400 + (ID) 100
Total energy: 15532.0 ( 913.65 by residue)
QMean score : 0.730
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