Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSVIIIESPNKVAKIREITGAK--VFATIGHFMQL----KSYDENN----------GFKPTFDYDQE------KKKHIFEMIE-ACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQ--NALLFENTNRQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREIEKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKACLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEAGLITYIRTDAESLSVEFLDETESFYAPIYKDLYLKREYK--AGKQSQAEAHEAIRITHPHTTEDLESIVYNANITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGLKSAGFLAMFSKKELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLSTIKRNAPSAYKEADFVKLLENKGIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQMEEVLDEIVENKSSY---VD-FISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNLSEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEILAKKHNVKLPKGFKYSMKVCGDFINEYHKK |
| 1MW8 Chain:X ((2-580)) | -GKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSG-------DERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQ-----ARRFMDRVVGYMVSPLLWKKIA--RGLSAGRVQSVAVRLVVEREREIKAF--VPEE---FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVL-EREDKPTTSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYAS-----EAREAIRPS------DVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPA-----EDRILPAVNK------------GDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYA---EKMGEIVTDRLEENFRELMNYDFTAQMENNLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQM-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173808 for 4097 contacts (-42.4/contact) +
2D Compatibility (PS) -53515 + (NN) 2261 + (LL) 10008
1D Compatibility (HY) -24800 + (ID) 8100
Total energy: -247954.0 ( -60.52 by residue)
QMean score : 0.401
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