Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA
2DSY Chain:A ((18-79))
--ARYELIADEEPYYGEIPDLPGVWATGKSLKECEANLQAALEDWLLFLLSRGETPPPLGEVRIELP-----
General information:
TITO was launched using:
RESULT:
Template:
2DSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35008 for 369 contacts (-94.9/contact) +
2D Compatibility (PS) -6954 + (NN) -2450 + (LL) 900
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -45912.0 ( -124.42 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_2DSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DSY-query.scw
PDB file :
Tito_Scwrl_2DSY.pdb
: