Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIKMAKDYGFCFGVKRAIQIAEKNQNSL-IFGS-------LIHNAKEINRLEKNFNVKIEEDPKKIPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQ---ALVVNSLEELQE--KKLQRKVALVSQTTKQTPKLLQIASYLVERCTEV--RIFNTICNATSYNQKAALDLSKEVDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENELELAWFKDKKLCGITAGASTPDWIIENVKQKISTI |
| 4MV5 Chain:A ((13-294)) | MQILLANPRGFCAGVDRAISIVE---NALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQ-ISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94218 for 2201 contacts (-42.8/contact) +
2D Compatibility (PS) -28699 + (NN) -7184 + (LL) 28
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -150373.0 ( -68.32 by residue)
QMean score : 0.495
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