Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDTLFNESLNKRFCFDEKVAHVFDDMLERSIPYYHEMLNLGAYFIAQNLKENVYHKSLPKPLIYDLGCSTGNFFIALNQQIQQDIELVGID---NSMPMLKKAQEKLKDFNNVRFECMDFLEVKFKEASAFSLLFVLQFVRPMQREVLLKKIYNSLALNGVLLVGEKIMSEDRILDKQMIELYYLYKQNQGYSHNEIAFKREALENVLVPYSLKENIALLESVGFKHVEALFKWVNFTLLVARKT
3T7R Chain:A ((53-163))
------------------------------------------------------------KSLIADLGCGTGGQTMILAQHVPGKI--TGIDFFPGFIERFNKNAEKLNLQNRVKGIVGSMDDLSF-EKDSLDLIWSEGAIYNIGFERGLKEWRNYLKPGGYLAVSESVWFTDQRPAEIHDFWMSAYTEIDTVPNKVAQIQKAGYIPVATFILPENCWIEHYFAPQAKAEEIFRRKHAGSRIVEEL
General information:
TITO was launched using:
RESULT:
Template:
3T7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94084 for 790 contacts (-119.1/contact) +
2D Compatibility (PS) -11575 + (NN) -3664 + (LL) 4804
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -111819.0 ( -141.54 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_3T7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T7R-query.scw
PDB file :
Tito_Scwrl_3T7R.pdb
: