Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-ECVEVLRCE-DFESLSDAVRFYLSKC-KESLKLHPIYGSFAVATPIMGDFV--Q-MTNNHWT-FSIET-TRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKV---A--KLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVM-KKTPGLDGAGIALENYLLHDRI |
| 3VGL Chain:A ((2-313)) | ------GLTIGVDIGGTKIAAGVVDEE-GRILSTFKVATPPTAEGIVDAICAAVAGASEGH---DVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGL-PVVVENDANAAAWGEYRFGAG----------QGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGL--------LCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAAR-QGDPVAVDSFRELARWAGAGLADLASLFDPS-AFIVGGGVSDEGELVLD--PIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162500 for 2746 contacts (-59.2/contact) +
2D Compatibility (PS) -30776 + (NN) -3065 + (LL) 3084
1D Compatibility (HY) 5200 + (ID) 2800
Total energy: -190857.0 ( -69.50 by residue)
QMean score : 0.325
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