Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDLPKDLPMQASALYLGFL-FKEVLKELGSQTWLKWPNDLYLGDQKIGGVMVNVYKGMRVCGIGVNRVSTKWACLDIGASDDWIIESFLKKIEENLFWGEVLSKYALEFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
1X01 Chain:A ((16-131))
--------FQEITSTNEFA----KTSYLEEGTVIVADKQTMGHGRLNRKWESPEGGLWLSIVLSPKVPQKDLP---KIVFLGAVGVVETLKEFSIDGRIKWPNDVLVNYKKIAGVLVEGKGDKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDGSFEGIAEDIDDFGRL
General information:
TITO was launched using:
RESULT:
Template:
1X01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51552 for 818 contacts (-63.0/contact) +
2D Compatibility (PS) -12632 + (NN) -9779 + (LL) 1844
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -82119.0 ( -100.39 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1X01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X01-query.scw
PDB file :
Tito_Scwrl_1X01.pdb
: