Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVIRLTRIGRKKKPFYRVVVTDSRKRRDGGWIESIGYYNPL-SEPKDVRIDKERLNYWKGVGAKMSERVEKLSQKA
1IBK Chain:P ((1-77))
MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQA
General information:
TITO was launched using:
RESULT:
Template:
1IBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29418 for 509 contacts (-57.8/contact) +
2D Compatibility (PS) -7944 + (NN) -3143 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -47505.0 ( -93.33 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1IBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBK-query.scw
PDB file :
Tito_Scwrl_1IBK.pdb
: