Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSPNLEKEETEIIETLLVREKMRLCPLYWRILAFLIDSLLVAFLLSDLLRACAFLHSLYWLTNPIYYSAFVVMGFIILYGVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLF
3ZG3 Chain:A ((4-45))
--------------------------------------------------------------TPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQL
General information:
TITO was launched using:
RESULT:
Template:
3ZG3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34007 for 226 contacts (-150.5/contact) +
2D Compatibility (PS) -4158 + (NN) 1548 + (LL) 6788
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -32929.0 ( -145.70 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_3ZG3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZG3-query.scw
PDB file :
Tito_Scwrl_3ZG3.pdb
: