Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEVNFNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYTPYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
3GK5 Chain:A ((112-198))
------------NIKAYTVLDVREPFELIFGSIANSINIPISELREKWKIL--ERDKKYAVICAHGNRSAAAVEFLSQLGLNIVDVEGGIQSWIEEGYPVV-----------
General information:
TITO was launched using:
RESULT:
Template:
3GK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53571 for 610 contacts (-87.8/contact) +
2D Compatibility (PS) -9562 + (NN) -2608 + (LL) 1576
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -70865.0 ( -116.17 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3GK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GK5-query.scw
PDB file :
Tito_Scwrl_3GK5.pdb
: