Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDISIFREYDIRGIYPTTLDENTAFSIGVELG-KIMREYDKSVFVGHDARVHGRFLFEVLSAGLQSSGLKVYDLGLIPTPVAYFAAFNEIDNIQCPNSIMITGSHNPKEYNGFKITLNQNPFYGKDIQALKNTLLNAKHEIKPLKETPEKVNALEAYHRYLIKDFKHLKNLKYKIALDFGNGVGALGLEPILKALNIDFSSLYSDPDGDFPNHHPDPSEAKNLKDLEKHMRENAILIGFAFDGDADRIAMLS-SHHIYAGDELAILFAKRLHAQGITPFVIGEVKCSQVMYNAINTF-GKTLMYKTGHSNLKIKLKETNAHFAAEMSGHIFFKERYFGYDDALYACLRALELLLEQSPSDLENTIKNLPYSYTTPEEKIAVSEEEKFEIIRNLQEALKNPPSHFPTIKEIISIDGVRVVFEHGFGLIRASNTTPYLVSRFEGKDETTALEYKRALLGLLEKL |
4IL8 Chain:A ((12-438)) | ---SIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAA----NVLEGKSGVMLTGSHNPPDYNGFKIVVAGETLANEQIQALRERI--EKNDLASGVGSVEQVDILPRYFKQIRDDIAMAKPMK--VVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGAVFFKERWFGFDDGIYSAARLLE-ILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGN------ITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216519 for 3837 contacts (-56.4/contact) +
2D Compatibility (PS) -46206 + (NN) -26999 + (LL) 1540
1D Compatibility (HY) -37600 + (ID) 8800
Total energy: -334584.0 ( -87.20 by residue)
QMean score : 0.511
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