Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSIRRGDGLNVVPFIDIMLVLLAIVLSISTFIAQGKIKVSLPNAKNAEKSQPNDQKVVVISVDEHDNIFVDDKPTNLEALSAVVKQTDPKTL------IDLKSDKSSRFETFISIMDILKEHNHENFSISTQAQ |
1QLS Chain:A ((42-98)) | ----------------------------------------------------------------------------NTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLAIACHDSFIKSTQK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 579 for 214 contacts (2.7/contact) +
2D Compatibility (PS) -5382 + (NN) -2930 + (LL) 5532
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -4701.0 ( -21.97 by residue)
QMean score : 0.373
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