Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIKTFLECALKEDLGH-----GDLFERVLEKDFKATAFVRAKQEGVFSGEKYALELLQMTG--IECVQNIKDKERFKPKDTLMEIRGDFSMLLKIERTLLNLLQHSSGIATLTSRFVEALNSPKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLKHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMSAGADIVMCDNMSVGETKE---IAAYREAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMKMA |
| 3PAJ Chain:A ((30-293)) | ----------LKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNP-GKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAA------LENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113223 for 2036 contacts (-55.6/contact) +
2D Compatibility (PS) -27099 + (NN) -8213 + (LL) 1872
1D Compatibility (HY) -18400 + (ID) 5050
Total energy: -170113.0 ( -83.55 by residue)
QMean score : 0.487
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