Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETTIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPDVKNLALLG--KNYDYICDKGEW-VEVGGAANASKIFNYFRANDLEGLEFLGQLPGTLGALVKMNAGMKEFEIKNV------LESACVNGEWLEKEALGLDYRSSGFN----------GVVLR--------------ARFKKTHGFREGVLKACKSMRKSHPKLP------NFGSCFKNP-----------------PND---------YAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAKTRVLQEYGIHLEEEVKILR |
1MBT Chain:A ((45-329)) | ------------------------------------ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTT--KLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110348 for 1556 contacts (-70.9/contact) +
2D Compatibility (PS) -22939 + (NN) -242 + (LL) 2464
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -148365.0 ( -95.35 by residue)
QMean score : 0.398
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