Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METLQTHRVLQALIGHFTPFLESGITELIINTEQELWLYKINNTREKRGHVLFDKAFLLRFCEQLASFRGLFFDEEHPTLNCSIPFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLEDFTFKVSNPESLKNLALKGHNILISGETSSGKTSLLNALLDCVN--KDERVVSVEDSQELDLKAFSNCVGLL-VGKQENTRFNYEDALNMAMRLNPDRLIVGEI-DTRNAALFLRLGNTGHKGMLSTIHANSAQNTLEALSLNLSMRYTHSLDKDLMRAYFKSAIDVIVHVNKINNERQIAEVLWTKEL |
2GSZ Chain:A ((100-239)) | --------------------------------------------------------------------------------------------------------SLPAEIPEFKKLGLPDKVLELCH--------RKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVG--EDTK-SFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHL-VFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61901 for 989 contacts (-62.6/contact) +
2D Compatibility (PS) -14426 + (NN) -7344 + (LL) 8820
1D Compatibility (HY) -9200 + (ID) 2350
Total energy: -86401.0 ( -87.36 by residue)
QMean score : 0.424
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