Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRKLLLQDFDKVALSLKKRNHAMDDELERLREAIAHYKKQL---IELEGLQAFQNKVSKEFGIKMAQKMDTSDLKKELENNKIKLNELSKSVGEAEQEMDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKE------------HFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKI---ENENLYLIPTAEVTLTNLYNDTIIS--VENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQ-LVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL |
| 3QO8 Chain:A ((14-435)) | ---------DPEIIKASQKKRG----DSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFK---DAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESV-VDSQDEENNELVRTWTPENYK-KPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGEDEK-YLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIK----KYVHCLNSTLSATERTICCILENYQKEDGLV-IPEVLRKYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92162 for 3120 contacts (-29.5/contact) +
2D Compatibility (PS) -42498 + (NN) -25487 + (LL) 2296
1D Compatibility (HY) -25600 + (ID) 6650
Total energy: -190101.0 ( -60.93 by residue)
QMean score : 0.458
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