Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALKKVNKEEEWKKLVKRFDVNYQFIPIIKNMLIGASVPQEFLFLAMAESKFSSRAYSRKKAVGIWQFMPSTAKELGLKVNHYIDERRDPIKSTQAAIAYLKRLYKQTGEWY-LVAMAYNYGLRKVQNAIKAAGTSDIKVLLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPTNKKLLATREF |
| 3SQC Chain:A ((463-508)) | ------------------------------------------------------------------------------------------------------------------------------------------------DAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAI----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10821 for 222 contacts (-48.7/contact) +
2D Compatibility (PS) -4692 + (NN) -822 + (LL) 16932
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -3503.0 ( -15.78 by residue)
QMean score : 0.495
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