Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVSVDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDYDRLK-DVIATATYAVVFSAIILTVAGVLLAKPLLILLRTPANILDDSTI-FLTTLFIGILPMSLYNGMAAILRALGNSITPLIFLILSSLMNIALDFLFVV----YMDMGVRGAAIATVLSQTAAAIAVIYY--AYRHVPFMRIERAKFKLSTPLLKEMVRIGLPSGLQGSFISIGNMALQSL-INGFGSSVVAAYTAASRIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGI--TILVQLFARQFLLLFVDSSETEVINIGVSYLLIVSLFYVVVGILFVVRETLRGTGDAMVPLAMGIFELVSRLVIGFVLSLYIGYVGLWWATPVAWITATILGVWRYKSGAWQKKAVIRRK |
3MKT Chain:A ((19-386)) | -----------------ATPVLIASVAQTGMGFVDTIMAGGVSAID-MAAVSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPII---AVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVA-AALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL--GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQ--VVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKD---------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -293787 for 3143 contacts (-93.5/contact) +
2D Compatibility (PS) -34715 + (NN) 16816 + (LL) 8472
1D Compatibility (HY) -34800 + (ID) 3950
Total energy: -341964.0 ( -108.80 by residue)
QMean score : 0.229
|
|
|