Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LATGIGTAKMILCGEHAVVYGEPAISV-----------PFTQAVVTTNVET-SIKTKFSSAFF----SGDLDDMPDFLAGIKALVVDVLNEIGNG------------------ECVSIHVVSGVPIGRGLGSSAAVATSIARGLYKYFNQ---------------ELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERDRKLEIMHFPKKITFVVADTGVPSETRDAVKDVQVLYKENQVEIGKIIHQLGDISREIKTHL-EGDADTVK-----IGAAMNKAQSYLETLTVSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIAVAKNQEIAEQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN |
| 1KVK Chain:A ((13-332)) | --------KVILHGEHAVVHGKVALAVALNLRTFLVLRPQSNGKVSLNLPNVGIKQVWDVATLQLLDT-------EKLKKVAGLPRDCVGNEGLSLLAFLYLYLAICRKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQGKMSSLKRLP-ALQILLTNTKVPRSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAAHGLH-SKLT-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82955 for 1724 contacts (-48.1/contact) +
2D Compatibility (PS) -26837 + (NN) -7242 + (LL) 3052
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -132532.0 ( -76.87 by residue)
QMean score : 0.504
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