Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMANTKTEQDFEKVLKRRDL--IAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGARFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGKVELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG |
| 1S0E Chain:A ((796-856)) | ----------DFDNTLKKNLLNYIDENKLYLIGSA---EYEKSKVNKYLKTIMPFDLSIYTNDTILIEMFNKYN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8795 for 286 contacts (30.8/contact) +
2D Compatibility (PS) -6240 + (NN) -2108 + (LL) 18728
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 14125.0 ( 49.39 by residue)
QMean score : -0.072
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