Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISHFEPVTVVASSSQ-------YVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNL--EKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNCEVVGVKAREIL--LGGGNIHCITQQVPR
5AK8 Chain:A ((44-310))-----------------------------------------------------------ITIVASESQKNTVITQYTQSGVNLSNCDFIIA-KTDSYWTRDYTGWFAMYDTNKVGLVDFIYNR----------PRPNDDEFPKYEAQYLGIEMFGM-KLKQTGGNYMTDGYGSAVQSH---IAYTENSSLSQAQVNQKMKDYLGITHHDVVQDPNGEYIN----HVDCWGKYLAPNKILIRKVPDN-HPQHQALEDMAAYFAAQTCAWGTKYEVYR------ALATNEQ---------------------PYTNSLILNNRVFVPVNGPASVDNDALNVYKTAMPGYEIIGVKGASGTPWLGTDALHARTHEV--


General information:
TITO was launched using:
RESULT:

Template: 5AK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65312 for 1985 contacts (-32.9/contact) +
2D Compatibility (PS) -27617 + (NN) -10549 + (LL) 5204
1D Compatibility (HY) -10400 + (ID) 3600
Total energy: -112274.0 ( -56.56 by residue)
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_5AK8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AK8-query.scw
PDB file : Tito_Scwrl_5AK8.pdb: