Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE |
| 3LQV Chain:P ((17-29)) | -----------------------------------------------------------------------------------------------------------------------------------DERNRPLSDEELD------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1508 for 38 contacts (39.7/contact) +
2D Compatibility (PS) -1333 + (NN) -609 + (LL) 17432
1D Compatibility (HY) 400 + (ID) 250
Total energy: 17148.0 ( 451.26 by residue)
QMean score : 0.455
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