Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGAS-KYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL
2JXX Chain:A ((23-95))
---SQQLQLRVQGKE--KHQTLEVSLSRDSPLKTLMSHYEEAMGLS-----GRKLSFFFDGTKLSGRELPADLGMESGDLIEV-
General information:
TITO was launched using:
RESULT:
Template:
2JXX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41202 for 494 contacts (-83.4/contact) +
2D Compatibility (PS) -7688 + (NN) -2036 + (LL) 772
1D Compatibility (HY) -4800 + (ID) 500
Total energy: -55454.0 ( -112.26 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2JXX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JXX-query.scw
PDB file :
Tito_Scwrl_2JXX.pdb
: