Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDR----------EYLKQNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLIS--GYD----INRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECG-----GKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEVTRITHAHPRSILGS-----YVYIEL---------LQNLFANM-DKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKE--SNIKSSGYVVDTLEASIWAFLTT-----------NSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 2G4K Chain:A ((6-323)) | -------------------RFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDP------------EALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVF------KKLLN--PKCRDVFEPARAQFNGKGSY--GNGGAMRVAGISLAYS---SVQDVQKFARLSAQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESW------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120133 for 2292 contacts (-52.4/contact) +
2D Compatibility (PS) -27275 + (NN) -9811 + (LL) 5416
1D Compatibility (HY) -14000 + (ID) 3800
Total energy: -169603.0 ( -74.00 by residue)
QMean score : 0.324
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