Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTSNINSELADGFQGYTDVRKITVNSTVDVGVSGSLTAVLGQVGSSFGLPGA-IGGLGVGL---VLDTILSLNG-----TKDTWKNSINEKMQDLEDWFRVEAK
1BRW Chain:B ((72-145))
------------------SSIRGVKVDKHSTGGVGDTTTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDEFIRLVNE--------------
General information:
TITO was launched using:
RESULT:
Template:
1BRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10515 for 297 contacts (-35.4/contact) +
2D Compatibility (PS) -6792 + (NN) -1357 + (LL) 2252
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -21112.0 ( -71.08 by residue)
QMean score : 0.049
(partial model without unconserved sides chains):
PDB file :
Tito_1BRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BRW-query.scw
PDB file :
Tito_Scwrl_1BRW.pdb
: