Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVSYYETILKSLRWVRKTMYTSNNQIKEEKNVTAIAITSERGLCGAYNSEVFAEIDQLIESLGDQVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTT----AVTAD-FIDLIHSEQMDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTELIEVDYVLD-FETD-DEQVEQLLLENYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEE--AIFDARKQALQQKTGELLDIISGAQTIRKDEE |
| 4B2Q Chain:G ((75-277)) | ---------------------------------------------------------------------------VAITSDKGLCGSIHSQLAKAVRR---HLNDQPNADIVTIGDKIKMQLLRTHPN---NIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIF-------NAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVI--TNELVDIITGASSL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100250 for 1288 contacts (-77.8/contact) +
2D Compatibility (PS) -20792 + (NN) -5964 + (LL) 8028
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -131978.0 ( -102.47 by residue)
QMean score : 0.326
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