Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY |
| 1JB0 Chain:I ((18-37)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VCWLMPTVVMGLLFLYIEGE---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5004 for 71 contacts (-70.5/contact) +
2D Compatibility (PS) -2266 + (NN) -1804 + (LL) 20492
1D Compatibility (HY) -3200 + (ID) 100
Total energy: 8118.0 ( 114.34 by residue)
QMean score : -0.109
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