Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYKNINQAPI-VKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLL-LSKKPITISSHENLLDQVDSFQTGNGLLTR
3LA2 Chain:A ((59-232))
----------------------------------DPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRF--YHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADG-ITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITV----------------------
General information:
TITO was launched using:
RESULT:
Template:
3LA2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112259 for 1200 contacts (-93.5/contact) +
2D Compatibility (PS) -18251 + (NN) -5016 + (LL) 3052
1D Compatibility (HY) -13200 + (ID) 2000
Total energy: -147674.0 ( -123.06 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_3LA2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA2-query.scw
PDB file :
Tito_Scwrl_3LA2.pdb
: