Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEVNDTTYILRFNKQKVKTVELTSGISLVA-----ALT--ANK-GILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGL---ISLNVAVIEKLQEDMGFLFR
1XKP Chain:A ((161-246))
---------------QALVSMAEEQGETIVLGARITPEAYRESQSGVNPLQPLRDTYRDAVMGYQGI--------YAIWSDLQ-RFPNGDIDSVILFLQ-ALSADL-----
General information:
TITO was launched using:
RESULT:
Template:
1XKP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18844 for 378 contacts (-49.9/contact) +
2D Compatibility (PS) -7186 + (NN) -2006 + (LL) 2588
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -29598.0 ( -78.30 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1XKP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XKP-query.scw
PDB file :
Tito_Scwrl_1XKP.pdb
: