Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATEIRVLKNVDDTVFYPKTHVTAVEGLDSATTTTSGLMPASDKTKLNGI-EANAEKNNVTAIDIANWNKKQDAILVSENGSNFKITVTNAGELKATKVE
3DT4 Chain:A ((546-594))
------------------------IEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEE--LFGISKEFWEKEVEEI-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7644 for 202 contacts (37.8/contact) +
2D Compatibility (PS) -5005 + (NN) -1481 + (LL) 3492
1D Compatibility (HY) -2800 + (ID) 850
Total energy: 1000.0 ( 4.95 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_3DT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DT4-query.scw
PDB file :
Tito_Scwrl_3DT4.pdb
: