Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINSRFYEGFEGEAELSFVAGDNKLLIWNGYFETILDNLLDCNVEREGVLKEYFNHEGWYDDSPWMIEDNSLTIIQLKCFDINKINQTSMKDDLEEVVKTIISFLENNRFSKIYIEYE
2IJQ Chain:A ((15-38))
------------------------------------------------------NPSGWRTDGQWEHETLRRAVVHGV----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2188 for 100 contacts (-21.9/contact) +
2D Compatibility (PS) -2457 + (NN) -1092 + (LL) 7004
1D Compatibility (HY) 400 + (ID) 300
Total energy: 1367.0 ( 13.67 by residue)
QMean score : -0.105
(partial model without unconserved sides chains):
PDB file :
Tito_2IJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IJQ-query.scw
PDB file :
Tito_Scwrl_2IJQ.pdb
: