Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYLENCDADNLYWISEIFEDISANLKSQKFIDYLRKLDKKFPELEMTQDIDIAESYF
2R80 Chain:A ((2-40))
------LSANDKSNVKAVFAKIGGQ-AGDLGGEALERLFITYPQTK------------
General information:
TITO was launched using:
RESULT:
Template:
2R80.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3703 for 165 contacts (22.4/contact) +
2D Compatibility (PS) -4209 + (NN) -1737 + (LL) 1820
1D Compatibility (HY) -400 + (ID) 300
Total energy: -1123.0 ( -6.81 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_2R80.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R80-query.scw
PDB file :
Tito_Scwrl_2R80.pdb
: