Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKIIAIDIDGTLLNDTHEITPAVRDSIKAAKAKGVKVVLCTGRPLAGIKKSLIELDLLDEGDYAITFNGAVVLETAS----EKTLAD-ITLNKTELEEIYAFCHAENVNVTYFDGKNMYVPSRKITEITCQDSLLLGTPLYHL--PVEEAPESIHVSKVMLLDSP------EKIT--DVIKKLPENIKEKFYVVRSVPYN---LEFLQKGVNKGSALASLADKLGVDQSEVMSIGDQENDITMIEYAGMGVAMGNATEHIKEIANYTTTTNNEDGVAQAIQMLILDR |
| 3DNP Chain:A ((7-267)) | --QLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAK---LITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQ-CNIRLLHEKYSIGNKKKV-----------NSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59640 for 1976 contacts (-30.2/contact) +
2D Compatibility (PS) -25993 + (NN) -1882 + (LL) 2440
1D Compatibility (HY) -16800 + (ID) 4500
Total energy: -106375.0 ( -53.83 by residue)
QMean score : 0.386
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