Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIPYNTLKHNSVSPADANFVNPNFDVVYSEAWIAV-------DDEHAVVLEVP-EIKNRYYTVQLLDGWGE-------VVTNINERNFPEHPHGKFAF-VKKGTNPSIPSDA---IKIELPSEKVKVLLRVEQKDDPEGAVKLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPKAAEFQDKARKVAAYIELGDDQKAEVRNLIVKEALPYFTNGAKGFGTQKGGWSVTYVAGAFENDILARAIINYGGIWANSIQEALYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWSVTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAGKEFSLNFRLYVPKKEVLEGKVFLPPLEVF |
| 3U07 Chain:A ((307-417)) | --------------------------------------------------------WGLPPIEASYRKSDFDSIGQKLDGSKH-DYVMRFKAPNVSEFWSVTIYGNDNRLMAKNDLNRHSRGDRTMKADKDGYYTIYMSANE----KGRADDPNFLPVPEKPFYAIMRFYGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11483 for 449 contacts (-25.6/contact) +
2D Compatibility (PS) -8673 + (NN) 3892 + (LL) 20616
1D Compatibility (HY) 4000 + (ID) 200
Total energy: 8152.0 ( 18.16 by residue)
QMean score : 0.075
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