Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWDLVSTIHFTGFENYKRLFNDPEFWKSFRN----TITF--IIGYLPSVMILGLACALMLNQKIKLRPFFRAVYFLP-VITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAVIITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVTIISLINSFQVFDQVMIMTEGG--------PSGATMTLVQNIYNHAFRYF---EMGYASAMSWILFIVIFIITIIQNKLQKRWSNY |
| 4KI0 Chain:F ((259-505)) | ---------------------------------------------------TGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWEALRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168680 for 1572 contacts (-107.3/contact) +
2D Compatibility (PS) -23796 + (NN) -9772 + (LL) 5188
1D Compatibility (HY) -25200 + (ID) 3900
Total energy: -226160.0 ( -143.87 by residue)
QMean score : 0.390
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