Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGKPVIHEFIVVEGRDDTTAINRSVIA--DTIETNGSALSQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE
2FCJ Chain:A ((1-107))
---MRRVEKVIIVEGRSDKQKVAAVLNEPVVIVCTNGT-ISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDRAYREV--------AAAPIWHLAQVLLRARFD--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34847 for 754 contacts (-46.2/contact) +
2D Compatibility (PS) -11555 + (NN) -3796 + (LL) 5856
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -51642.0 ( -68.49 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_2FCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCJ-query.scw
PDB file :
Tito_Scwrl_2FCJ.pdb
: