Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGDFLKEK |
3FYC Chain:A ((2-221)) | --------------------------AQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFN---------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEM------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156365 for 1692 contacts (-92.4/contact) +
2D Compatibility (PS) -23334 + (NN) -3045 + (LL) 4856
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -198538.0 ( -117.34 by residue)
QMean score : 0.517
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