Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
4NOV Chain:A ((114-163))
-------------DARAWAPQAVERNGKFYLY-CPVHKRNGGMAIAVGISDSPTGPFKDLGYPL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4NOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16666 for 260 contacts (-64.1/contact) +
2D Compatibility (PS) -5819 + (NN) -5406 + (LL) 4236
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -27155.0 ( -104.44 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_4NOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NOV-query.scw
PDB file :
Tito_Scwrl_4NOV.pdb
: