Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEV-----ISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
3E6B Chain:A ((23-223))
-----EKLRNYTQMGLIR--DFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGS-EKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDE---------DMIFEIFKNYLTKVAYYARQVAEMN---PTIRILRLFYELCSSQGKRVGDTYEITMP-LSQKSIGEITGVHHVT-VSRVLASLKRENILDKKKNKIIVYNLGELK----------------------
General information:
TITO was launched using:
RESULT:
Template:
3E6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105230 for 1247 contacts (-84.4/contact) +
2D Compatibility (PS) -20008 + (NN) -915 + (LL) 2928
1D Compatibility (HY) -12000 + (ID) 2550
Total energy: -137775.0 ( -110.49 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_3E6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E6B-query.scw
PDB file :
Tito_Scwrl_3E6B.pdb
: