Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
3T9G Chain:A ((68-79))
-------------------------------------------GIHCYGDNVVEN----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3T9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2168 for 29 contacts (-74.8/contact) +
2D Compatibility (PS) -1182 + (NN) 599 + (LL) 8688
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 4537.0 ( 156.45 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3T9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T9G-query.scw
PDB file :
Tito_Scwrl_3T9G.pdb
: