Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAV--RTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQYDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVLGTTPGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL
3H2A Chain:A ((41-294))----------LIMGILNVTPDSFS--GSYNEVDAAVRHAKEMRDEGAHIIDIGG----------SVEEEIKRVVPMIQAVSKEVKLP---ISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK------


General information:
TITO was launched using:
RESULT:

Template: 3H2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139479 for 2086 contacts (-66.9/contact) +
2D Compatibility (PS) -27024 + (NN) -19503 + (LL) 1500
1D Compatibility (HY) -26400 + (ID) 7250
Total energy: -218156.0 ( -104.58 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3H2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H2A-query.scw
PDB file : Tito_Scwrl_3H2A.pdb: