Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVFEPRLSSWLENAGDDDDVVLSSRIRLARNLKDEQF-PI-----YEQKEEIVDNIAEVFDDNF--ILIKMNQISLLQKALLVEKHLISP------YMMNKSEYG----AVLLNEEENVSIMLNEEDHLRIQCMTPGLRLFDALEAALQIDGYVEEKLSYAFDKEFGYLTSCVTNIGTGMRASVMVHLPGLVTTKRIKSVIEAIRS-LGFVVRGIYGEGSMPASNIFQVSNQVTLGKTEAEIVEDLTQVMEQIIMQERVARTTLKQKFHIALEDRVFRSYGLLMNCRIISMKEAADAISDIRFGVELGFFEHISRQKMNELVLFSQPAFLRREAGRDMDELEEKVIRAKVIREILGDK |
| 1SD0 Chain:A ((120-356)) | ---------------------IISTRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKTVYKRLVTAVDNIESKLPFSHDDRFGFLTFAPTNLGTTMRASVHIQLPKLAKDRK---VLEDIASKFNLQVRGTRGEHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIRMEKAA-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131167 for 1655 contacts (-79.3/contact) +
2D Compatibility (PS) -24027 + (NN) -10113 + (LL) 9944
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -170363.0 ( -102.94 by residue)
QMean score : 0.426
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